Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885338.1_cds_XP_016439310.1_34877
CDS Infomation

[gene=LOC107765205] [db_xref=GeneID:107765205] [protein=patatin-like protein 6] [protein_id=XP_016439310.1] [location=complement(join(8615..8899,9806..10876,12098..12197,14320..14489))] [gbkey=CDS]
Sequence

ATGCTATTACCACTTGCTGAGCTTGCAACATTTAATCAACCGCAAGCTAACCTTATCACC
TTCCACTTTGGTGCTTCTCGAGCCGATGACCGAGGTGCCCCGCGAATGCTTTTTTCAGGG
TTAGCTGGTAGGTTAATGTTGATGGAAACCTGTGAGTTAGCATCAATCGGGGTTTGGGTG
GGTGGGGAGATTGACGAAGATGTCACATATCGTATTGGAGCGGGATGGATGGAATGGAGA
CTTGCTCCCGGTGTTTTGTGTGATAAGAAGGNTATTCTAGAAAGCAAGTTCTTATTTGGT
TACGATGATCAGAAGCTTTGGATTCCTAAACAAATAGCTCCGGCAGTTGAACATCACAAG
AACGTTAACGACGTCGTGTTGACATCTTCACCGGTGCGGGAGGGGCACGGCGTTCAGGCA
ATCAAAAACCAGAGGGGTAAAATCTGTATCCTCAGCATAGATGGTGGTGGAATGCGAAGC
ATCCTATCAGGAAAAGCTTTAGCGTCTCTTGAACAGGCGTTGAAGGTTAAATCGGGAAAT
TCAGATGCTAGAATCGCCGATTATTTCGACGTCGCTGCCGGTTCCGGCGTCGGAGGAATA
TTCACCACCATGCTCTTCTCCACCAAGGACCAAAACCGCCCCTTGTTTCACGCTGAGGAC
ACGTGGAAGCTTCTAGCGGAACAAAGCAAAAAATTCTACCCTACCAAAGGTTCAAATTCC
GGCGGTTTTCTCAGGCAAATTATCTGCGGCGGAGGCGGTGGTGATTCGACCGGTTCAGCA
ACGGACGGTTTAGAGAAGTCGATGAAGGAGGCCTTTGTAGATAAAACCGGTCGAAGCCTC
ACGTTAAAGGACACGTTGAAACCTGTTTTGATCCCATGTTACGACCTTTCAAGTACGGCG
CCGTTTTTGTTCTCCAGAGCTGATGCTTTAGAAACCGACAGCTTCGACTTCTGTCTATGG
GAGGTGTGTAGGGCCACGTCAGCAGAGCCGGGAGTGTTCGAGCCCGTTTGTATGAAGTCC
GTCGACGGGAAAACCAAGTGCGTGGCGGTTGACGGCGGATTAGCCATGAGCAACCCGACG
GCGGCGGCGATTACCCACGTGCTTCACAACAAGCAAGAATTCCCCTTCGTGAGAGGTGTG
GAGGACATTTTGGTACTTTCACTAGGGACAGGTCAGCTCCTAGAAGGAAGCTTTGACTAT
GAGCAAGTCAAGAATTGGAAGGAAAAGGACTGGGCTCGACCAATGGCTCGAATTTCTGGC
GATGGCTCAGCTGATATGGTGGACCACTCAGTTGCCATGGCTTTTGGCCAATATCGTAGC
AGTAATTACGTGCGCATTCAGGCTAACGGATCGAGCTTTGGTCGTTGTGGTGTGAATGTA
GACGCTGACCCAAGTCCTAGCAATGTGAAAACGCTGGCTGGGATAGCAGATGAAATGCTG
AAACAGAAAAATGTAGAGTCTGTGCTTTTCGGTGGCAAGAGAATTGCAGAGCAAAGCAAT
TTACAGAAACTTGACTGGTTTGCTGGAGAACTAGTGCAAGAGCATCAGAAAAGGAGTTGC
CGGATAGCTCCCACTGTTGCATTTAAGCAAGCTACACCAAAAGCTTCCCAAACATCTCTC
AAATAA

Peptide Sequence

PEP ID

XP_016439310.1
PEP Infomation

PREDICTED: patatin-like protein 6 [Nicotiana tabacum]
Sequence

MLLPLAELATFNQPQANLITFHFGASRADDRGAPRMLFSGLAGRLMLMETCELASIGVWV
GGEIDEDVTYRIGAGWMEWRLAPGVLCDKKXILESKFLFGYDDQKLWIPKQIAPAVEHHK
NVNDVVLTSSPVREGHGVQAIKNQRGKICILSIDGGGMRSILSGKALASLEQALKVKSGN
SDARIADYFDVAAGSGVGGIFTTMLFSTKDQNRPLFHAEDTWKLLAEQSKKFYPTKGSNS
GGFLRQIICGGGGGDSTGSATDGLEKSMKEAFVDKTGRSLTLKDTLKPVLIPCYDLSSTA
PFLFSRADALETDSFDFCLWEVCRATSAEPGVFEPVCMKSVDGKTKCVAVDGGLAMSNPT
AAAITHVLHNKQEFPFVRGVEDILVLSLGTGQLLEGSFDYEQVKNWKEKDWARPMARISG
DGSADMVDHSVAMAFGQYRSSNYVRIQANGSSFGRCGVNVDADPSPSNVKTLAGIADEML
KQKNVESVLFGGKRIAEQSNLQKLDWFAGELVQEHQKRSCRIAPTVAFKQATPKASQTSL
K

Transcript Sequence

Gene sequence data has not been registered.